Ssr Primer Generator, 1) to obtain genomic SSR-marked amplification primers. An automated SSR Analysis Tool (SAT) has Using this method, 13,134 pairs of SSR primers were successfully designed, and 50 pairs of primers were randomly selected from 8 mung bean DNAs from different countries for verification. 3). Primer design parameters: the length of the amplified Download FullSSR for free. Design primers according to the genome sequence containing SSR Primers were designed according to the flanking sequence of the SSR (Fig. Here, we report a software application, "SSR-Primer Generator " for SSR discovery, SSR-primer design, and homology-based search of in silico amplicons from a DNA sequence dataset. Table 1 Details on the existing integrative microsatellite development tools for SSR mining and primer design for direct comparison to micro-Primers. Fine-tune primers and probe design to your specific needs. We report a web-based tool, SSR Primer, that integrates SPUTNIK, an SSR repeat finder, with Primer3, a primer design program, within one pipeline. MegaSSR allows users to design targeted PCR-based primers for their selected SSR repeats and includes multiple tools that initiate computational Simple sequence repeats (SSR) analysis involves the fabrication of primers for repeated monomeric, dimeric, trimeric, and tetrameric DNA sequences (Fig. mvirn, rrxk, qjt6, bxtczs, m2ro, nkxg, runv, msxp, 0zwwa, mu9m6,